MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus danieliae
STR.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 1,967,238 bps
CDS: 1,829
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 72
misc RNA:
Total features: 1,909
Total number of protein coding genes annotated/found:
1,829
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5003|JADGKG010000134.1
SEQF5003_00533
Genome Viewer
NA
AA
369/123
62237-62605
50S ribosomal protein L7/L12
SEQF5003|JADGKG010000134.1
SEQF5003_00532
Genome Viewer
NA
AA
501/167
61676-62176
50S ribosomal protein L10
SEQF5003|JADGKG010000134.1
SEQF5003_00531
Genome Viewer
NA
AA
1257/419
60116-61372
3-hydroxy-3-methylglutaryl-coenzyme A reductase
SEQF5003|JADGKG010000134.1
SEQF5003_00530
Genome Viewer
NA
AA
1158/386
58916-60073
Hydroxymethylglutaryl-CoA synthase
SEQF5003|JADGKG010000022.1
SEQF5003_00802
Genome Viewer
NA
AA
2160/720
58123-55964
Anaerobic ribonucleoside-triphosphate reductase
SEQF5003|JADGKG010000134.1
SEQF5003_00529
Genome Viewer
NA
AA
1188/396
57710-58897
Acetyl-CoA acetyltransferase
SEQF5003|JADGKG010000134.1
SEQF5003_00528
Genome Viewer
NA
AA
1002/334
56608-57609
Isopentenyl-diphosphate delta-isomerase
SEQF5003|JADGKG010000022.1
SEQF5003_00801
Genome Viewer
NA
AA
531/177
55951-55421
hypothetical protein
SEQF5003|JADGKG010000134.1
SEQF5003_00527
Genome Viewer
NA
AA
996/332
55616-56611
Phosphomevalonate kinase
SEQF5003|JADGKG010000022.1
SEQF5003_00800
Genome Viewer
NA
AA
558/186
55434-54877
hypothetical protein
SEQF5003|JADGKG010000134.1
SEQF5003_00526
Genome Viewer
NA
AA
954/318
54673-55626
hypothetical protein
SEQF5003|JADGKG010000125.1
SEQF5003_01058
Genome Viewer
NA
AA
1374/458
54343-55716
tRNA modification GTPase MnmE
SEQF5003|JADGKG010000134.1
SEQF5003_00525
Genome Viewer
NA
AA
876/292
53816-54691
Homoserine kinase
SEQF5003|JADGKG010000022.1
SEQF5003_00797
Genome Viewer
NA
AA
1320/440
53812-52493
hypothetical protein
SEQF5003|JADGKG010000125.1
SEQF5003_01057
Genome Viewer
NA
AA
426/142
53040-53465
hypothetical protein
SEQF5003|JADGKG010000134.1
SEQF5003_00524
Genome Viewer
NA
AA
456/152
53033-53488
hypothetical protein
SEQF5003|JADGKG010000022.1
SEQF5003_00796
Genome Viewer
NA
AA
438/146
52477-52040
Propanediol utilization protein PduV
SEQF5003|JADGKG010000181.1
SEQF5003_01260
Genome Viewer
NA
AA
615/205
52218-52832
Peptide deformylase
SEQF5003|JADGKG010000134.1
SEQF5003_00523
Genome Viewer
NA
AA
843/281
52186-53028
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase
SEQF5003|JADGKG010000125.1
SEQF5003_01056
Genome Viewer
NA
AA
1143/381
52117-50975
Cysteine desulfurase IscS
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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